Step 7 - Refine the Simulation
Restart the simulation and monitor the progress of the r-factors and eReq value in the EPSR
module.
Refine (EPSR) layer tab
Double-click the
EPSR
module to open it in a tab and see all of the associated graphs
Click the
R-Factor
tab to view theR-Factor
(bottom) andEReq
(top) graphs
Once the additional energy has stabilised at 10.0, we can increase it to 20.0 to improve our fit a little more.
Find the
EPSR
module optionsChange the EReq value to 20
Keep running until the applied potential gets to the new limit - we don’t want the empirical potential to be varying too much while we’re conducting our production run, otherwise any properties we calculate may be calculated from a series of configuration that do no represent a stable structural point. Once it has, we can save another restart file if we want:
Simulation ⇨ Save Restart Point…
Change the filename to
refined.restart
and click Save
Start the simulation
Pause the simulation